STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW03327.1KEGG: dol:Dole_1834 hypothetical protein; SPTR: Putative uncharacterized protein. (421 aa)    
Predicted Functional Partners:
AEW03328.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bbe:BBR47_37860 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: Capm protein (Capm2).
       0.773
AEW03329.1
PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: cat:CA2559_13078 putative flippase; PFAM: Polysaccharide biosynthesis protein; SPTR: Putative flippase.
       0.733
AEW03326.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pin:Ping_0456 glycosyl transferase, group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1.
       0.680
AEW03330.1
UDP-glucuronate 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: wsu:WS0025 putative UDP-glucuronic acid epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate 4-epimerase; SPTR: Putative uncharacterized protein.
       0.678
AEW03331.1
Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR005702:IPR003856; KEGG: cpi:Cpin_2359 capsular exopolysaccharide family; PFAM: Lipopolysaccharide biosynthesis; SPTR: Capsular exopolysaccharide family; TIGRFAM: Exopolysaccharide synthesis protein.
       0.677
AEW03332.1
PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: cpi:Cpin_2358 polysaccharide export periplasmic protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain; SPTR: Periplasmic protein involved in polysaccharide export.
       0.677
AEW03324.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ppn:Palpr_1126 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Putative uncharacterized protein.
       0.675
AEW03325.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: hmo:HM1_1179 glycosyltransferase, group 1 family protein, putative; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase.
       0.671
AEW03323.1
PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: pdi:BDI_0038 hypothetical protein; PFAM: Polysaccharide deacetylase; SPTR: Putative uncharacterized protein.
       0.539
AEW03322.1
PFAM: Protein of unknown function (DUF354); COGs: COG1817 conserved hypothetical protein; InterPro IPR007152; KEGG: mma:MM_2110 hypothetical protein; PFAM: Protein of unknown function DUF354; SPTR: Putative uncharacterized protein.
       0.537
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.