STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW03341.1KEGG: cpi:Cpin_0171 hypothetical protein; SPTR: Putative uncharacterized protein. (1073 aa)    
Predicted Functional Partners:
AEV99842.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: cpi:Cpin_0005 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
 
   0.654
AEW00492.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR004292:IPR000531; KEGG: sli:Slin_6376 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; Adenoviral 52K-like protein; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor.
  
    0.646
AEV99843.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_0004 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
    0.622
AEW03342.1
Hypothetical protein.
       0.618
AEW00491.1
KEGG: sli:Slin_6375 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.586
AEW03506.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_1220 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug.
  
     0.520
AEV97702.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_5532 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug.
  
     0.509
AEW01432.1
KEGG: cao:Celal_0123 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.500
AEV98958.1
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_5287 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor.
  
     0.498
AEW03507.1
RagB/SusD domain-containing protein; PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_1221 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein.
  
     0.496
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.