STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW03359.1Carbohydrate binding family 6; InterPro IPR006584:IPR005084; KEGG: bth:BT_0127 putative transmembrane protein; PFAM: Carbohydrate binding domain, family 6; SMART: Cellulose binding, type IV; SPTR: Carbohydrate binding module (Family 6). (1738 aa)    
Predicted Functional Partners:
AEV98951.1
gpW/GP25 family protein; PFAM: Gene 25-like lysozyme; KEGG: cpi:Cpin_2306 gpW/GP25 family protein; SPTR: GPW/gp25 family protein.
 
  
 0.822
AEV96861.1
KEGG: ana:all3326 hypothetical protein; SPTR: All3326 protein.
  
  
 0.810
AEV96862.1
PFAM: Phage tail sheath protein; COGs: COG3497 Phage tail sheath protein FI; InterPro IPR007067; KEGG: dar:Daro_3614 putative phage tail sheath protein FI; SPTR: Putative phage tail sheath protein FI.
  
  
 0.810
AEV96867.1
Rhs element Vgr protein; PFAM: Phage-related baseplate assembly protein; TIGRFAM: Rhs element Vgr protein; COGs: COG3500 Phage protein D; InterPro IPR006533; KEGG: fjo:Fjoh_3155 rhs element Vgr protein; PFAM: Rhs element Vgr protein; SPTR: Rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein.
  
  
 0.807
AEV96869.1
GPW/gp25 family protein; PFAM: Gene 25-like lysozyme; COGs: COG3628 Phage baseplate assembly protein W; InterPro IPR007048; KEGG: gbm:Gbem_2552 phage baseplate outer wedge protein; PFAM: GPW/gp25; SPTR: Phage baseplate outer wedge protein (Acidic lysozyme), putative.
  
  
 0.797
AEW00851.1
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: cyc:PCC7424_4392 BRCT domain protein; SPTR: BRCT domain protein.
 
     0.778
AEW01240.1
KEGG: phe:Phep_2141 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.775
AEV99117.1
Fibronectin type III domain protein; InterPro IPR006626:IPR003961; KEGG: ppn:Palpr_2963 hypothetical protein; PFAM: Fibronectin, type III; SPTR: Putative uncharacterized protein.
 
     0.769
AEV98017.1
KEGG: kfl:Kfla_6357 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.767
AEW03394.1
Hypothetical protein; TIGRFAM: parallel beta-helix repeat (two copies); InterPro IPR006626; KEGG: mno:Mnod_6850 hemolysin-type calcium-binding region; SPTR: Hemolysin-type calcium-binding region.
 
     0.766
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.