STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW03400.1Exo-poly-alpha-galacturonosidase; PFAM: Glycosyl hydrolases family 28; COGs: COG5434 Endopygalactorunase; InterPro IPR006626:IPR000743; KEGG: sli:Slin_4784 glycoside hydrolase family 28; PFAM: Glycoside hydrolase, family 28; PRIAM: Exo-poly-alpha-galacturonosidase; SPTR: Glycoside hydrolase family 28. (532 aa)    
Predicted Functional Partners:
AEW01545.1
Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: sli:Slin_1242 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Lipolytic protein G-D-S-L family.
   0.896
AEW01535.1
PFAM: Glycosyl Hydrolase Family 88; COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: psn:Pedsa_2722 glycosyl hydrolase family 88; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase family 88.
     0.851
AEW01542.1
PFAM: Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: shg:Sph21_2885 pectinesterase; PFAM: Pectinesterase, catalytic; SPTR: Pectinesterase; manually curated.
 
   
 0.773
AEV99952.1
G-D-S-L family lipolytic protein; COGs: COG2755 Lysophospholipase L1 and related esterase; KEGG: tsa:AciPR4_1718 G-D-S-L family lipolytic protein; SPTR: Lipolytic protein G-D-S-L family.
   0.772
AEW02152.1
PFAM: Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: shg:Sph21_2885 pectinesterase; PFAM: Pectinesterase, catalytic; PRIAM: Pectinesterase; SPTR: Pectin methylesterase.
 
   
 0.771
AEV98197.1
PFAM: Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: bvu:BVU_1116 polysaccharide lyase family protein 10, pectate lyase; PFAM: Pectinesterase, catalytic; SPTR: Polysaccharide lyase family 10.
 
   
 0.765
AEW01541.1
Xylan 1,4-beta-xylosidase; PFAM: Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: sli:Slin_4788 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
    0.705
AEV99940.1
Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: shg:Sph21_0469 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: Putative uncharacterized protein.
  
   0.699
AEV99953.1
PFAM: Glycosyl Hydrolase Family 88; COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: sli:Slin_0456 glycosyl hydrolase family 88; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase family 88.
     0.690
AEW01544.1
PFAM: Pectinesterase; COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: psn:Pedsa_3356 binary exotoxin B/Anthrax toxin B moiety protective antigen; PFAM: Pectinesterase, catalytic; PRIAM: Pectinesterase; SPTR: Binary exotoxin B/Anthrax toxin B moiety protective antigen.
 
   
 0.673
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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