STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW03411.1KEGG: ccb:Clocel_2179 hypothetical protein; SPTR: Putative uncharacterized protein. (332 aa)    
Predicted Functional Partners:
AEW03412.1
Hypothetical protein.
       0.620
AEW03409.1
TIGRFAM: RHS repeat-associated core domain; KEGG: cpi:Cpin_4225 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: RHS repeat-associated core domain.
       0.576
AEW03410.1
Hypothetical protein.
       0.576
AEW00307.1
COGs: COG3391 conserved hypothetical protein; KEGG: ava:Ava_0960 peptidoglycan binding domain-containing protein; SPTR: Peptidoglycan-binding domain 1.
  
     0.529
AEV97497.1
KEGG: bmd:BMD_2955 hypothetical protein; SPTR: Predicted protein.
  
     0.504
AEV96538.1
KEGG: coc:Coch_0300 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.490
AEW00061.1
KEGG: fbc:FB2170_02105 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.416
AEW01592.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439:IPR003593; KEGG: wvi:Weevi_0617 xenobiotic-transporting ATPase; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative ABC transporter, ATP-binding protein.
  
     0.408
Your Current Organism:
Niastella koreensis
NCBI taxonomy Id: 700598
Other names: N. koreensis GR20-10, Niastella koreensis DSM 17620, Niastella koreensis GR20-10, Niastella koreensis NBRC 106392, Niastella koreensis str. GR20-10, Niastella koreensis strain GR20-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.