Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORA85289.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)    
Predicted Functional Partners:
ORA85291.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.895
ORA85696.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.857
ORA85292.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.849
ORA85293.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.833
ORA85290.1
Dynein regulation protein LC7; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.809
ORA93922.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.803
ORA90486.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.803
ORA86502.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.783
ORA85642.1
2-oxoglutarate dehydrogenase E1 component; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.783
ORA86942.1
Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.736
Your Current Organism:
Mycobacterium marseillense
NCBI taxonomy Id: 701042
Other names: CCUG 56325, CIP 109828, CSUR P30, DSM 45437, JCM 17324, M. marseillense, Mycobacterium marseillense Ben Salah et al. 2009, Mycobacterium sp. 1165549.7, strain 5356591
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