STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M2UYK3_COCH5Fungal_trans domain-containing protein. (674 aa)    
Predicted Functional Partners:
M2US44_COCH5
SPRY domain-containing protein.
    
 0.744
M2UG55_COCH5
WD_REPEATS_REGION domain-containing protein.
    
 0.735
M2THD2_COCH5
Histone H2B; Belongs to the histone H2B family.
    
  0.658
M2TDF3_COCH5
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.591
M2V5C0_COCH5
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.591
M2VAP7_COCH5
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.591
M2UE52_COCH5
Histone H2A; Belongs to the histone H2A family.
    
  0.558
M2UQE6_COCH5
Uncharacterized protein.
    
  0.558
M2UQD2_COCH5
CENP-T_C domain-containing protein.
   
 
 0.492
M2TK49_COCH5
Uncharacterized protein.
    
   0.481
Your Current Organism:
Bipolaris maydis
NCBI taxonomy Id: 701091
Other names: B. maydis C5, Bipolaris maydis C5, Cochliobolus heterostrophus ATCC 48332, Cochliobolus heterostrophus C5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.