STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46304.1KEGG: kva:Kvar_0026 multidrug/H+ antiporter, major facilitator superfamily (MFS); TIGRFAM: multidrug/H+ antiporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1. (394 aa)    
Predicted Functional Partners:
ADO46333.1
KEGG: ent:Ent638_0043 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.
  
   
 0.575
ADO48220.1
PFAM: major facilitator superfamily MFS_1; KEGG: kva:Kvar_1837 major facilitator superfamily MFS_1.
  
   
 0.527
uspB
PFAM: Universal stress protein B; KEGG: kva:Kvar_0242 universal stress protein B.
  
     0.491
ADO50255.1
PFAM: regulatory protein TetR; KEGG: enc:ECL_00533 putative transcriptional regulator.
  
     0.439
ADO48969.1
Anti-sigma-28 factor, FlgM; KEGG: cro:ROD_11381 negative regulator of flagellin synthesis (anti-sigma factor); TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
  
     0.419
ADO46305.1
PFAM: Protein of unknown function DUF2136; KEGG: sbo:SBO_2944 hypothetical protein.
       0.404
ADO46306.1
Transcriptional regulator, XRE family; KEGG: epy:EpC_pEp360190 conserved uncharacterized protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
       0.404
ADO50185.1
PFAM: Conserved hypothetical protein, YtfJ; KEGG: enc:ECL_00613 putative transcriptional regulator.
  
     0.402
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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