STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46311.1L-fucose transporter; KEGG: spq:SPAB_04713 hypothetical protein; TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1. (438 aa)    
Predicted Functional Partners:
ADO46312.1
Hypothetical protein; KEGG: sea:SeAg_B4017 DeoX.
 
     0.948
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
    0.863
ADO50030.1
PFAM: dihydrodipicolinate synthetase; KEGG: cro:ROD_25481 putative dihydrodipicolinate synthetase; Belongs to the DapA family.
  
  
 0.739
ADO46315.1
Phosphoglycerate transporter; KEGG: ent:Ent638_0029 regulatory protein UhpC; TIGRFAM: phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1.
  
  
 0.632
ADO47735.1
PFAM: major facilitator superfamily MFS_1; KEGG: seh:SeHA_C2530 major facilitator family transporter.
 
  
 0.574
rhaM
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.557
ADO46313.1
Two component transcriptional regulator, LuxR family; KEGG: enc:ECL_00036 DNA-binding transcriptional activator UhpA; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR.
       0.552
ADO46314.1
Integral membrane sensor signal transduction histidine kinase; KEGG: enc:ECL_00037 sensory histidine kinase UhpB; PFAM: MASE1 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
       0.552
ADO46466.1
PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_5260 general substrate transporter.
  
  
 0.514
ADO50043.1
KEGG: kva:Kvar_4470 4-hydroxyphenylacetate transporter; TIGRFAM: 4-hydroxyphenylacetate transporter; PFAM: major facilitator superfamily MFS_1.
  
  
 0.514
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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