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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46351.1KEGG: eoh:ECO103_0297 hypothetical protein. (279 aa)    
Predicted Functional Partners:
ADO46352.1
KEGG: enc:ECL_04001 FdrA family protein.
 
 
 0.960
ADO46353.1
PFAM: protein of unknown function DUF1116; KEGG: enc:ECL_04000 hypothetical protein.
 
   0.954
ADO46350.1
PFAM: Ankyrin; KEGG: ent:Ent638_3145 ankyrin.
 
    0.812
ADO48675.1
KEGG: kva:Kvar_2900 primary-amine oxidase; PFAM: Copper amine oxidase domain-containing protein; Copper amine oxidase N3-terminal; copper amine oxidase-like domain-containing protein; Copper amine oxidase N2-terminal.
  
     0.691
ADO46354.1
KEGG: eok:G2583_0428 carbamate kinase family protein; PFAM: aspartate/glutamate/uridylate kinase; Belongs to the carbamate kinase family.
 
     0.674
ADO50067.1
PFAM: protein of unknown function DUF1398; KEGG: sec:SC1853 putative cytoplasmic protein.
  
     0.662
ADO46897.1
PFAM: alpha-L-rhamnosidase; KEGG: eoh:ECO103_3825 putative glycosyl hydrolase.
  
     0.658
ADO46948.1
KEGG: seg:SG0292 hypothetical protein.
  
     0.640
ADO48093.1
Manually curated; PFAM: helix-turn-helix domain protein; KEGG: seg:SG1189 predicted phage regulatory protein; SMART: helix-turn-helix domain protein.
  
     0.630
ADO47465.1
Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: kva:Kvar_3881 transcriptional regulator, CadC.
  
     0.614
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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