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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46431.1Transcriptional regulator, CadC; PFAM: transcriptional regulator domain-containing protein; KEGG: efe:EFER_2778 putative regulatory protein. (266 aa)    
Predicted Functional Partners:
ADO46430.1
KEGG: enc:ECL_00096 hypothetical protein.
  
    0.798
ADO50610.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ect:ECIAI39_3127 putative sugar phosphate isomerase.
  
     0.600
ADO47394.1
PFAM: tail assembly chaperone gp38; KEGG: ent:Ent638_3483 phage tail assembly chaperone GP38.
  
     0.593
ADO50608.1
KEGG: cko:CKO_03128 hypothetical protein; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; Pertactin.
  
     0.568
ADO50274.1
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ebr:ECB_00522 bacteriophage N4 receptor, outer membrane subunit.
  
     0.548
ADO50321.1
Manually curated; PFAM: Sel1 domain protein repeat-containing protein; KEGG: enc:ECL_00332 Sel1 domain-containing protein; SMART: Sel1 domain protein repeat-containing protein.
  
     0.525
ADO46419.1
KEGG: kva:Kvar_0155 hypothetical protein.
  
     0.524
ADO46429.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: enc:ECL_00178 LysR family transcriptional regulator.
 
     0.520
ADO48041.1
KEGG: eck:EC55989_1643 putative lipoprotein/autotransporter domain-containing protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin; Polymorphic membrane protein Chlamydia.
  
     0.498
ADO48275.1
KEGG: ecw:EcE24377A_1711 outer membrane autotransporter domain-containing protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein.
  
     0.485
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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