Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO46446.1Transcriptional regulator, IclR family; KEGG: cko:CKO_05032 hypothetical protein; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR. (271 aa)    
Predicted Functional Partners:
ADO46444.1
PFAM: inner-membrane translocator; KEGG: spe:Spro_3930 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
     0.594
dlgD
Malate/L-lactate dehydrogenase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.
 
   
 0.590
ADO49359.1
Allophanate hydrolase subunit 1; KEGG: ybgJ; uncharacterized protein YbgJ; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1.
  
    0.579
ADO49358.1
Urea amidolyase related protein; SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: cko:CKO_02456 hypothetical protein; PFAM: Allophanate hydrolase subunit 2.
  
    0.568
ADO46443.1
KEGG: pwa:Pecwa_3887 hypothetical protein.
 
     0.557
ADO48562.1
KEGG: enc:ECL_02172 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.536
ADO46942.1
PFAM: transposase IS3/IS911 family protein; KEGG: dze:Dd1591_1227 transposase IS3/IS911 family protein.
 
     0.494
ADO46445.1
KEGG: spe:Spro_3929 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.482
ADO46437.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: cko:CKO_05037 hypothetical protein.
 
   
 0.468
ADO48619.1
KEGG: ctu:Ctu_20950 HTH-type transcriptional regulator McbR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.461
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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