STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylATIGRFAM: xylose isomerase; KEGG: enc:ECL_00201 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the xylose isomerase family. (440 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; KEGG: cro:ROD_42421 xylulose kinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
 
 
 0.994
ADO47798.1
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: enc:ECL_03470 hypothetical protein; PFAM: phosphotransferase system EIIC.
     
 0.937
ADO50278.1
KEGG: ppr:PBPRA2715 putative PTS system, fructose-specific IIABC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC.
     
 0.937
ADO49668.1
PFAM: ROK family protein; KEGG: cko:CKO_02777 hypothetical protein.
    
 0.911
ADO50316.1
PFAM: protein of unknown function DUF1498; KEGG: enc:ECL_00341 hypothetical protein.
     
  0.900
ADO46454.1
KEGG: kva:Kvar_0173 D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.875
ADO46901.1
Beta-galactosidase; KEGG: ecm:EcSMS35_3370 cryptic beta-D-galactosidase subunit alpha; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region.
    
 0.821
lacZ
PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: enc:ECL_01221 beta galactosidase; Belongs to the glycosyl hydrolase 2 family.
    
 0.821
glk
TIGRFAM: glucokinase; KEGG: kpu:KP1_3989 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.817
ADO46900.1
PFAM: Conserved hypothetical protein CHP00022; KEGG: ecm:EcSMS35_3371 cryptic beta-D-galactosidase subunit beta.
     
  0.800
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.