STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46468.1PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: enc:ECL_00218 xylose isomerase domain-containing protein. (248 aa)    
Predicted Functional Partners:
ADO46467.1
PFAM: PfkB domain protein; KEGG: enc:ECL_00216 ribokinase-like domain-containing protein.
  
 0.978
ADO46466.1
PFAM: major facilitator superfamily MFS_1; KEGG: kpu:KP1_5260 general substrate transporter.
 
    0.825
ADO46469.1
KEGG: ent:Ent638_0171 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI.
 
    0.734
ghrB
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.
 
    0.605
ADO47524.1
PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: eic:NT01EI_2136 putative malonic semialdehyde oxidative decarboxylase; Belongs to the TPP enzyme family.
  
  
 0.580
ADO48412.1
PFAM: Fimbrial protein domain-containing protein; KEGG: cko:CKO_01220 hypothetical protein.
  
     0.578
ADO47532.1
KEGG: enc:ECL_03800 5-deoxy-glucuronate isomerase.
  
  
 0.561
ADO47530.1
PFAM: Protein of unknown function DUF2090; PfkB domain protein; KEGG: enc:ECL_03802 5-dehydro-2-deoxygluconokinase.
  
  
 0.554
ADO48132.1
PFAM: minor tail family protein; KEGG: enc:ECL_01711 GP17.
  
     0.405
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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