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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46475.1Oxalate/Formate Antiporter; KEGG: cko:CKO_04997 hypothetical protein; TIGRFAM: Oxalate/Formate Antiporter; PFAM: major facilitator superfamily MFS_1. (400 aa)    
Predicted Functional Partners:
ADO47950.1
KEGG: kva:Kvar_2810 flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; NADH:flavin oxidoreductase/NADH oxidase; FMN-binding domain protein.
 
   
 0.569
ADO47624.1
KEGG: ent:Ent638_2919 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
   
 0.495
ADO47561.1
PFAM: phospholipase/Carboxylesterase; KEGG: cko:CKO_00314 esterase YpfH.
  
    0.481
ADO48313.1
TIGRFAM: nitrate reductase, alpha subunit; KEGG: enc:ECL_01622 nitrate reductase 1, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.481
ADO48607.1
TIGRFAM: nitrate reductase, alpha subunit; KEGG: cko:CKO_01503 hypothetical protein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.481
ADO46474.1
KEGG: ent:Ent638_0176 putative lipase.
       0.447
ADO46476.1
PFAM: sulfatase; protein of unknown function DUF1705; KEGG: kva:Kvar_0199 sulfatase.
       0.436
ADO47623.1
Two component transcriptional regulator, LytTR family; KEGG: cko:CKO_00419 hypothetical protein; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver.
 
   
 0.436
ADO48315.1
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: kpu:KP1_3323 nitrate reductase 1 delta subunit; PFAM: TorD-like chaperone.
  
  
 0.433
ADO48609.1
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: kpu:KP1_2948 cryptic nitrate reductase 2 delta subunit; PFAM: TorD-like chaperone.
  
  
 0.433
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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