STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADO46496.1Diguanylate phosphodiesterase; KEGG: sea:SeAg_B3818 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein. (257 aa)    
Predicted Functional Partners:
flhD
Flagellar transcriptional activator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.
    
 
 0.844
ADO48416.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: mfa:Mfla_1114 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein.
 
 
 0.821
ADO49050.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ecg:E2348C_1912 predicted diguanylate cyclase; SMART: GGDEF domain containing protein.
  
  
 0.815
ADO48051.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sed:SeD_A1253 cellulose synthesis regulatory protein; SMART: GGDEF domain containing protein.
  
  
 0.797
ADO49582.1
KEGG: enc:ECL_01224 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein.
 
  
 0.797
ADO47535.1
KEGG: kpe:KPK_1302 cyclic diguanylate phosphodiesterase (EAL) domain protein; PFAM: EAL domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
  
    0.793
ADO47616.1
Diguanylate cyclase/phosphodiesterase; KEGG: kpn:KPN_02745 hypothetical protein; PFAM: EAL domain protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
  
    0.788
ADO50002.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: kva:Kvar_4425 diguanylate cyclase; SMART: GGDEF domain containing protein.
  
  
 0.787
ADO50443.1
Manually curated; PFAM: EAL domain protein; KEGG: cko:CKO_02697 hypothetical protein; SMART: EAL domain protein.
  
   
 0.787
ADO49492.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: kpe:KPK_1732 diguanylate cyclase/cyclic diguanylate phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein.
 
  
 0.784
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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