STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46498.1Ribonuclease; KEGG: cko:CKO_04962 hypothetical protein; TIGRFAM: ribonuclease; PFAM: ribonuclease BN. (311 aa)    
Predicted Functional Partners:
ADO48681.1
KEGG: ent:Ent638_1943 hypothetical protein.
 
     0.667
ADO46291.1
PFAM: protein of unknown function DUF1375; KEGG: enc:ECL_00014 hypothetical protein.
  
     0.663
ADO46873.1
KEGG: ses:SARI_04396 hypothetical protein.
  
     0.645
ADO47072.1
KEGG: cko:CKO_04333 hypothetical protein.
  
     0.616
thiK
Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
 
     0.611
ADO49455.1
PFAM: MbtH domain protein; KEGG: cro:ROD_05951 enterochelin esterase (ferric enterobactin esterase).
  
     0.600
ADO46556.1
PFAM: protein of unknown function DUF1145; KEGG: kva:Kvar_0269 protein of unknown function DUF1145.
  
     0.598
ADO48994.1
KEGG: efe:EFER_1895 hypothetical protein.
  
   
 0.590
secM
Secretion monitor family proten; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
   
 0.574
ADO46499.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cko:CKO_04961 hypothetical protein.
       0.570
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.