Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO46580.1PFAM: Pirin domain protein; KEGG: sea:SeAg_B3744 protein YhhW; Belongs to the pirin family. (231 aa)    
Predicted Functional Partners:
ADO46989.1
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: enc:ECL_04366 hypothetical protein.
 
  
 0.785
ADO46581.1
Transcriptional regulator, LacI family; KEGG: set:SEN3366 gluconate utilization operon repressor; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI.
       0.549
azoR
NAD(P)H dehydrogenase (quinone); Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
  
  
 0.540
ADO46579.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sed:SeD_A3914 putative dehydrogenase.
       0.499
ADO46582.1
TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: ecf:ECH74115_4753 gluconate kinase 1; PFAM: shikimate kinase.
       0.460
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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