STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46617.1KEGG: kpu:KP1_5096 hypothetical protein. (237 aa)    
Predicted Functional Partners:
ADO46618.1
PFAM: Fimbrial assembly family protein; KEGG: kpu:KP1_5095 hypothetical protein.
  
 
 0.986
ADO46621.1
Type IV pilus secretin PilQ; KEGG: kpn:KPN_03762 outer membrane porin HofQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein.
 
 
 0.964
ADO46619.1
KEGG: kpn:KPN_03764 hypothetical protein.
  
    0.817
ADO46620.1
Hypothetical protein; Manually curated; KEGG: efe:EFER_3358 hypothetical protein.
       0.805
damX
Sporulation domain-containing protein; Non-essential cell division protein.
 
     0.766
ADO46291.1
PFAM: protein of unknown function DUF1375; KEGG: enc:ECL_00014 hypothetical protein.
  
     0.765
ADO47562.1
KEGG: enc:ECL_03770 hypothetical protein.
  
     0.762
ADO46464.1
KEGG: kva:Kvar_0187 putative lipoprotein.
  
     0.756
thiK
Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
  
     0.756
ADO46485.1
KEGG: efe:EFER_3521 putative cellulose biosynthesis protease; manually curated; TIGRFAM: cellulose biosynthesis protein BcsE.
  
     0.755
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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