STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46620.1Hypothetical protein; Manually curated; KEGG: efe:EFER_3358 hypothetical protein. (134 aa)    
Predicted Functional Partners:
ADO46619.1
KEGG: kpn:KPN_03764 hypothetical protein.
  
    0.863
ADO46621.1
Type IV pilus secretin PilQ; KEGG: kpn:KPN_03762 outer membrane porin HofQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein.
  
    0.823
ADO46618.1
PFAM: Fimbrial assembly family protein; KEGG: kpu:KP1_5095 hypothetical protein.
  
    0.811
ADO46617.1
KEGG: kpu:KP1_5096 hypothetical protein.
       0.805
ADO46616.1
TIGRFAM: penicillin-binding protein, 1A family; KEGG: ent:Ent638_3809 peptidoglycan synthetase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
       0.538
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.470
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.