Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO46626.1TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: sbc:SbBS512_E3763 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (225 aa)    
Predicted Functional Partners:
ADO47691.1
PFAM: Transketolase domain-containing protein; KEGG: cko:CKO_00492 hypothetical protein.
  
 0.986
ADO49133.1
PFAM: Transketolase domain-containing protein; KEGG: cro:ROD_09661 hypothetical protein.
  
 0.981
ADO47568.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 
 0.964
ADO47094.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
 
 0.963
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
  
 0.952
ADO47924.1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.943
ADO49134.1
PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: cro:ROD_09651 hypothetical protein.
 
 
 0.942
ADO46650.1
Phosphoribulokinase; KEGG: esa:ESA_04378 hypothetical protein.
  
 
 0.933
ADO47692.1
PFAM: Transketolase domain-containing protein; Transketolase central region; KEGG: ent:Ent638_2842 transketolase subunit B.
 
 
 0.933
xylB
Xylulokinase; KEGG: cro:ROD_42421 xylulose kinase; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like.
 
  
 0.920
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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