STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YhfGyhfG; KEGG: yhfG; uncharacterized protein YhfG. (55 aa)    
Predicted Functional Partners:
ADO46644.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: ses:SARI_04145 cell filamentation protein Fic.
  
 
 0.979
ADO46944.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: ypy:YPK_0608 filamentation induced by cAMP protein Fic.
  
 
 0.812
ADO46645.1
KEGG: cko:CKO_04782 para-aminobenzoate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I.
     
 0.701
ADO46642.1
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.543
ADO48253.1
PFAM: SpoVR family protein; KEGG: ecm:EcSMS35_1961 SpoVR family protein.
   
    0.502
argD
Succinylornithine transaminase family; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
    0.496
uspB
PFAM: Universal stress protein B; KEGG: kva:Kvar_0242 universal stress protein B.
   
    0.465
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.