STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smgPFAM: protein of unknown function DUF494; KEGG: ent:Ent638_3716 hypothetical protein; Belongs to the Smg family. (157 aa)    
Predicted Functional Partners:
ADO46707.1
KEGG: ecs:ECs4151 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein.
     
 0.809
ADO46709.1
PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: kva:Kvar_0420 DNA topoisomerase type IA zn finger domain protein.
 
   
 0.787
tsaC
SUA5/yciO/yrdC domain protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.
       0.743
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.743
ADO46712.1
PFAM: protein of unknown function DUF1488; KEGG: ecz:ECS88_3668 hypothetical protein.
       0.743
zapD
Protein of unknown function DUF1342; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.
  
     0.717
ADO46983.1
PFAM: protein of unknown function DUF526; KEGG: ent:Ent638_3454 hypothetical protein.
  
     0.688
ADO49400.1
PFAM: protein of unknown function DUF1451; KEGG: enc:ECL_03053 hypothetical protein.
  
     0.660
ADO48241.1
Outer membrane lipoprotein, Slp family; KEGG: kpu:KP1_3448 putative outer membrane protein; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp.
  
     0.619
dedD
Sporulation domain-containing protein; Non-essential cell division protein that could be required for efficient cell constriction.
  
     0.606
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.