Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO46718.1KEGG: cko:CKO_04679 hypothetical protein. (73 aa)    
Predicted Functional Partners:
ADO48802.1
PFAM: protein of unknown function Spy-related; KEGG: kva:Kvar_3088 protein of unknown function Spy-related protein.
   
    0.777
mdtC
PFAM: acriflavin resistance protein; KEGG: kva:Kvar_1535 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.
   
    0.699
mdtA
Manually curated; TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: ecv:APECO1_1164 multidrug efflux system subunit MdtA; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
    0.698
mdtB
PFAM: acriflavin resistance protein; KEGG: kva:Kvar_1536 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.
   
    0.692
ADO50577.1
PFAM: protein of unknown function Spy-related; KEGG: sew:SeSA_A4277 periplasmic repressor CpxP.
   
    0.681
ADO48199.1
PFAM: protein of unknown function DUF533; KEGG: ent:Ent638_2417 hypothetical protein.
   
    0.503
ADO46720.1
KEGG: kpe:KPK_0445 acriflavine resistance protein E; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.489
ADO46719.1
KEGG: kva:Kvar_0426 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein.
  
    0.477
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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