Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO46773.1KEGG: cko:CKO_04604 putative ABC transporter ATP-binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase. (241 aa)    
Predicted Functional Partners:
lptC
Protein of unknown function DUF1239; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
  
 
 0.997
ADO50128.1
PFAM: permease YjgP/YjgQ family protein; KEGG: ent:Ent638_3647 permease YjgP/YjgQ family protein.
 
 
 0.996
ADO50127.1
PFAM: permease YjgP/YjgQ family protein; KEGG: cko:CKO_03536 hypothetical protein.
 
 
 0.995
lptA
Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
  
  
 0.991
ADO46777.1
TIGRFAM: KpsF/GutQ family protein; KEGG: enc:ECL_04579 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein.
 
  
 0.947
ADO46776.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
 
  
 0.920
ADO46778.1
Na+/Ca+ antiporter, CaCA family; KEGG: ent:Ent638_3632 putative calcium/sodium:proton antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region.
     
 0.821
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
 0.808
ADO46780.1
PFAM: protein of unknown function DUF140; KEGG: kva:Kvar_0495 protein of unknown function DUF140.
 
  
  0.779
ADO46771.1
KEGG: spq:SPAB_04139 putative sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA.
  
  
 0.775
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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