STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46780.1PFAM: protein of unknown function DUF140; KEGG: kva:Kvar_0495 protein of unknown function DUF140. (260 aa)    
Predicted Functional Partners:
ADO46779.1
ABC transporter related protein; KEGG: enc:ECL_04577 putative ABC transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.999
ADO46781.1
PFAM: Mammalian cell entry related domain protein; KEGG: set:SEN3144 possible exported protein.
 
 0.999
ADO46782.1
PFAM: toluene tolerance family protein; KEGG: enc:ECL_04574 toluene tolerance protein Ttg2D.
 
 
 0.981
ADO46783.1
KEGG: kpu:KP1_4913 hypothetical protein.
  
 0.967
ADO48831.1
KEGG: kva:Kvar_3382 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
   
   0.870
ADO48214.1
PFAM: Mammalian cell entry related domain protein; KEGG: cko:CKO_01139 hypothetical protein.
  
 
 0.812
ADO46773.1
KEGG: cko:CKO_04604 putative ABC transporter ATP-binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
  0.746
ADO46777.1
TIGRFAM: KpsF/GutQ family protein; KEGG: enc:ECL_04579 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein.
 
     0.686
ADO47649.1
PFAM: VacJ family lipoprotein; KEGG: set:SEN2374 VacJ lipoprotein precursor.
 
   
 0.606
lptC
Protein of unknown function DUF1239; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA. Belongs to the LptC family.
     
 0.603
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.