STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46786.1KEGG: kva:Kvar_0501 putative transcriptional regulator, Nlp. (89 aa)    
Predicted Functional Partners:
ADO48494.1
PFAM: protein of unknown function DUF1471; KEGG: kpu:KP1_2535 hypothetical protein.
  
     0.731
lpoB
Membrane lipoprotein lipid attachment site; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.
  
     0.592
ADO49575.1
PFAM: Haemolysin expression modulating family protein; KEGG: sdy:SDY_0459 hemolysin expression-modulating protein.
  
     0.565
ADO50246.1
KEGG: enc:ECL_00545 putative outer membrane lipoprotein.
  
     0.563
ADO50577.1
PFAM: protein of unknown function Spy-related; KEGG: sew:SeSA_A4277 periplasmic repressor CpxP.
  
     0.551
ADO48083.1
PFAM: Protein of unknown function DUF2594; KEGG: kva:Kvar_1694 protein of unknown function DUF2594.
  
     0.527
ADO46823.1
KEGG: cro:ROD_46781 hypothetical protein; Belongs to the UPF0306 family.
  
     0.520
ADO48206.1
PFAM: Protein of unknown function DUF2511; KEGG: kva:Kvar_1753 protein of unknown function DUF2511.
  
     0.490
ADO46556.1
PFAM: protein of unknown function DUF1145; KEGG: kva:Kvar_0269 protein of unknown function DUF1145.
  
     0.489
ADO49255.1
PFAM: virulence-related outer membrane protein; KEGG: ses:SARI_02093 outer membrane protein X.
  
     0.472
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.