STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpoALppC family lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family. (713 aa)    
Predicted Functional Partners:
ADO46827.1
PFAM: Uncharacterised protein family UPF0102; KEGG: enc:ECL_04530 putative endonuclease; Belongs to the UPF0102 family.
 
   
 0.842
ADO46616.1
TIGRFAM: penicillin-binding protein, 1A family; KEGG: ent:Ent638_3809 peptidoglycan synthetase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase.
  
 
 
 0.771
ADO47072.1
KEGG: cko:CKO_04333 hypothetical protein.
  
     0.764
ADO48994.1
KEGG: efe:EFER_1895 hypothetical protein.
  
     0.760
ADO48787.1
KEGG: enc:ECL_02427 putative regulatory protein.
  
     0.759
diaA
Sugar isomerase (SIS); Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily.
  
    0.757
ADO46556.1
PFAM: protein of unknown function DUF1145; KEGG: kva:Kvar_0269 protein of unknown function DUF1145.
  
     0.753
ADO48237.1
PFAM: protein of unknown function UPF0181; KEGG: sdy:SDY_1717 hypothetical protein; Belongs to the UPF0181 family.
  
     0.749
ADO46825.1
KEGG: kpu:KP1_4864 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region.
  
    0.746
ADO48976.1
KEGG: cko:CKO_02000 hypothetical protein.
  
     0.742
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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