STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46830.1PFAM: filamentation induced by cAMP protein Fic; KEGG: kpu:KP1_4857 hypothetical protein. (338 aa)    
Predicted Functional Partners:
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.805
lpoA
LppC family lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family.
       0.612
ADO46827.1
PFAM: Uncharacterised protein family UPF0102; KEGG: enc:ECL_04530 putative endonuclease; Belongs to the UPF0102 family.
       0.609
diaA
Sugar isomerase (SIS); Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily.
       0.552
ADO46825.1
KEGG: kpu:KP1_4864 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region.
       0.551
ADO46944.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: ypy:YPK_0608 filamentation induced by cAMP protein Fic.
 
  
 0.403
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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