Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADO46852.1KEGG: bcu:BCAH820_5363 hypothetical protein. (261 aa)    
Predicted Functional Partners:
ADO46853.1
KEGG: esa:ESA_03357 hypothetical protein.
       0.614
ADO46851.1
PFAM: transposase IS3/IS911 family protein; KEGG: eoh:ECO103_p90 putative IS629 transposase OrfA.
       0.565
ADO46850.1
PFAM: ABC-2 type transporter; KEGG: eum:ECUMN_3434 polysialic acid transport protein.
       0.512
ADO46849.1
KEGG: esa:ESA_03358 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.485
ADO46855.1
PFAM: glycosyl transferase group 1; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: sna:Snas_2409 glycosyl transferase group 1.
       0.464
ADO46854.1
KEGG: pvx:PVX_092280 hypothetical protein.
       0.448
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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