STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46886.1PFAM: protein of unknown function DUF45; KEGG: enc:ECL_04487 hypothetical protein. (164 aa)    
Predicted Functional Partners:
ADO46885.1
PFAM: oxidoreductase domain protein; KEGG: cro:ROD_48011 putative oxidoreductase.
 
     0.672
rlmG
rRNA (guanine-N(2)-)-methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.
 
     0.636
rlmF
rRNA (adenine-N(6)-)-methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.
 
     0.570
ADO47840.1
PFAM: protein of unknown function DUF1456; KEGG: kva:Kvar_1504 protein of unknown function DUF1456.
 
    0.564
ppnP
Protein of unknown function DUF1255; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
  
     0.475
ADO48973.1
PFAM: protein of unknown function DUF480; KEGG: kva:Kvar_3303 protein of unknown function DUF480; Belongs to the UPF0502 family.
  
     0.467
ADO47955.1
PFAM: peptidase M14 carboxypeptidase A; KEGG: mxa:MXAN_5214 hypothetical protein.
 
     0.454
ADO49787.1
PFAM: YaeQ family protein; KEGG: kpe:KPK_4530 hypothetical protein.
 
    0.445
rdgC
Exonuclease RdgC; May be involved in recombination; Belongs to the RdgC family.
 
     0.414
ADO50069.1
PFAM: protein of unknown function DUF1294; KEGG: sed:SeD_A1709 cyanate transport.
  
     0.410
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.