Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO46898.1PFAM: amino acid permease-associated region; KEGG: eoi:ECO111_3900 putative transporter. (477 aa)    
Predicted Functional Partners:
ADO46897.1
PFAM: alpha-L-rhamnosidase; KEGG: eoh:ECO103_3825 putative glycosyl hydrolase.
 
   
 0.927
ADO48686.1
KEGG: ppr:PBPRA1156 putative outer membrane lipoprotein.
  
     0.611
ADO46351.1
KEGG: eoh:ECO103_0297 hypothetical protein.
  
     0.599
ADO46902.1
Transcriptional regulator, LacI family; KEGG: ect:ECIAI39_3573 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
 
   
 0.577
ADO46901.1
Beta-galactosidase; KEGG: ecm:EcSMS35_3370 cryptic beta-D-galactosidase subunit alpha; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region.
 
  
 0.523
ADO48854.1
PFAM: porin Gram-negative type; KEGG: ses:SARI_00441 hypothetical protein.
  
    0.522
ADO50067.1
PFAM: protein of unknown function DUF1398; KEGG: sec:SC1853 putative cytoplasmic protein.
  
     0.522
ADO46899.1
PFAM: amino acid permease-associated region; KEGG: aha:AHA_0209 amino acid permease.
 
    
0.449
ADO46903.1
PFAM: t-RNA-binding domain-containing protein; KEGG: sbo:SBO_2933 hypothetical protein.
 
   
 0.441
dtpD
Amino acid/peptide transporter; Probable proton-dependent permease that transports dipeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpD subfamily.
  
 
   0.428
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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