STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46899.1PFAM: amino acid permease-associated region; KEGG: aha:AHA_0209 amino acid permease. (477 aa)    
Predicted Functional Partners:
ADO46897.1
PFAM: alpha-L-rhamnosidase; KEGG: eoh:ECO103_3825 putative glycosyl hydrolase.
 
     0.790
ADO48686.1
KEGG: ppr:PBPRA1156 putative outer membrane lipoprotein.
  
     0.681
ADO46901.1
Beta-galactosidase; KEGG: ecm:EcSMS35_3370 cryptic beta-D-galactosidase subunit alpha; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region.
 
   
 0.650
ADO46902.1
Transcriptional regulator, LacI family; KEGG: ect:ECIAI39_3573 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI.
 
     0.619
ADO50067.1
PFAM: protein of unknown function DUF1398; KEGG: sec:SC1853 putative cytoplasmic protein.
  
     0.571
ADO46900.1
PFAM: Conserved hypothetical protein CHP00022; KEGG: ecm:EcSMS35_3371 cryptic beta-D-galactosidase subunit beta.
       0.538
ADO46351.1
KEGG: eoh:ECO103_0297 hypothetical protein.
  
     0.494
ADO48734.1
PFAM: MltA-interacting MipA family protein; KEGG: aha:AHA_1673 MltA-interacting protein MipA.
  
     0.455
ADO46898.1
PFAM: amino acid permease-associated region; KEGG: eoi:ECO111_3900 putative transporter.
 
    
0.450
dtpD
Amino acid/peptide transporter; Probable proton-dependent permease that transports dipeptides; Belongs to the PTR2/POT transporter (TC 2.A.17) family. DtpD subfamily.
  
 
 0.424
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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