STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46910.1PFAM: Fimbrial protein domain-containing protein; KEGG: stm:STM0025 fimbrial subunit. (177 aa)    
Predicted Functional Partners:
ADO46908.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sek:SSPA0021 fimbrial usher.
 
 
 0.934
ADO46912.1
PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: see:SNSL254_A0029 fimbrial chaperone.
 
   0.915
ADO46907.1
PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ses:SARI_02970 hypothetical protein.
 
   0.903
ADO46911.1
PFAM: Fimbrial protein domain-containing protein; KEGG: sew:SeSA_A0028 fimbrial protein.
 
    
0.823
ADO48998.1
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: seh:SeHA_C2384 fimbrial usher protein.
  
 
 0.799
ADO46909.1
PFAM: Fimbrial protein domain-containing protein; KEGG: sek:SSPA0022 fimbrial subunit.
       0.742
ADO48999.1
PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: sea:SeAg_B2296 gram-negative pilus assembly chaperone.
  
 
 0.727
ADO50067.1
PFAM: protein of unknown function DUF1398; KEGG: sec:SC1853 putative cytoplasmic protein.
  
     0.712
ADO50096.1
PFAM: Fimbrial protein domain-containing protein; KEGG: sew:SeSA_A3199 fimbrial protein.
  
     0.704
rcsD
Hpt sensor signal transduction histidine kinase; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
  
     0.698
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.