STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46939.1PFAM: protein of unknown function UPF0027; KEGG: cro:ROD_37281 hypothetical protein. (408 aa)    
Predicted Functional Partners:
ADO46940.1
Band 7 protein; KEGG: eoh:ECO103_4769 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein.
 
   0.943
ADO46938.1
PFAM: Nucleotidyltransferase, predicted; KEGG: ecr:ECIAI1_4247 hypothetical protein.
 
    0.938
ADO46941.1
Sigma 54 interacting domain protein; KEGG: cro:ROD_37291 transcriptional regulator; PFAM: regulator of RNA terminal phosphate cyclase; sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase.
  
     0.745
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
  
 0.434
ADO49647.1
KEGG: cro:ROD_04591 putative DeoR-family transcriptional regulator.
 
     0.408
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.