STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO46940.1Band 7 protein; KEGG: eoh:ECO103_4769 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein. (375 aa)    
Predicted Functional Partners:
ADO46938.1
PFAM: Nucleotidyltransferase, predicted; KEGG: ecr:ECIAI1_4247 hypothetical protein.
 
  
 0.962
ADO46939.1
PFAM: protein of unknown function UPF0027; KEGG: cro:ROD_37281 hypothetical protein.
 
 
 0.956
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
 0.732
ADO49551.1
PFAM: protein of unknown function DUF107; KEGG: set:SEN0481 hypothetical protein.
 
 
 0.701
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.619
ADO46941.1
Sigma 54 interacting domain protein; KEGG: cro:ROD_37291 transcriptional regulator; PFAM: regulator of RNA terminal phosphate cyclase; sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase.
  
     0.532
ADO46494.1
PFAM: peptidase M16 domain protein; KEGG: kpu:KP1_5218 putative peptidase.
  
 0.499
ADO47083.1
PFAM: protein of unknown function DUF179; KEGG: ent:Ent638_3352 hypothetical protein; Belongs to the UPF0301 (AlgH) family.
  
    0.480
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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