Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO46943.1PFAM: integrase family protein; KEGG: eoh:ECO103_3814 putative integrase; Belongs to the 'phage' integrase family. (444 aa)    
Predicted Functional Partners:
ADO46944.1
PFAM: filamentation induced by cAMP protein Fic; KEGG: ypy:YPK_0608 filamentation induced by cAMP protein Fic.
       0.635
ADO47419.1
TIGRFAM: chorismate mutase; KEGG: cko:CKO_03920 bifunctional chorismate mutase/prephenate dehydrogenase; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase.
  
    0.536
ADO46600.1
PFAM: phosphoribosyltransferase; KEGG: ses:SARI_04105 gluconate periplasmic binding protein.
   
    0.526
ADO48142.1
PFAM: protein of unknown function DUF159; KEGG: kva:Kvar_1824 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family.
   
    0.510
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.485
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
   
    0.485
rpsU
Ribosomal protein S21; KEGG: pam:PANA_3388 RpsU; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
 
 0.404
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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