Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO46960.1KEGG: ebw:BWG_0234 CP4-6 prophage; hypothetical protein. (275 aa)    
Predicted Functional Partners:
ADO46964.1
PFAM: Antirestriction protein; KEGG: ecm:EcSMS35_0307 antirestriction protein.
 
    0.795
ADO50074.1
PFAM: Antirestriction protein; KEGG: ecm:EcSMS35_0307 antirestriction protein.
 
    0.756
ADO46959.1
PFAM: GTP-binding protein HSR1-related; KEGG: ebw:BWG_2389 CP4-57 prophage; putative GTP-binding protein.
 
    0.683
ADO49785.1
KEGG: kva:Kvar_4175 copper resistance lipoprotein NlpE.
  
     0.652
ADO46961.1
KEGG: ddc:Dd586_2893 regulatory protein DeoR.
 
    0.552
ADO46969.1
KEGG: xbo:XBJ1_1836 hypothetical protein.
 
   
 0.520
ADO47561.1
PFAM: phospholipase/Carboxylesterase; KEGG: cko:CKO_00314 esterase YpfH.
  
     0.490
ADO46957.1
KEGG: bxe:Bxe_A1800 ATP-dependent endonuclease.
 
     0.467
ADO49380.1
PFAM: outer membrane porin; KEGG: kpe:KPK_3870 outer membrane porin, OprD family.
  
     0.465
ADO48979.1
KEGG: kpu:KP1_2060 biofilm formation regulatory protein BssS.
  
     0.455
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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