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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO46961.1KEGG: ddc:Dd586_2893 regulatory protein DeoR. (236 aa)    
Predicted Functional Partners:
ADO46959.1
PFAM: GTP-binding protein HSR1-related; KEGG: ebw:BWG_2389 CP4-57 prophage; putative GTP-binding protein.
 
    0.827
ADO50297.1
KEGG: ent:Ent638_0312 hypothetical protein.
  
     0.767
ADO50080.1
PFAM: GTP-binding protein HSR1-related; KEGG: ebw:BWG_2389 CP4-57 prophage; putative GTP-binding protein.
 
    0.727
ADO46962.1
KEGG: seg:SG0278 hypothetical protein.
       0.701
ADO47893.1
PFAM: glycosyl transferase group 1; KEGG: enc:ECL_03380 putative glycosyl transferase.
  
     0.628
ADO46964.1
PFAM: Antirestriction protein; KEGG: ecm:EcSMS35_0307 antirestriction protein.
 
    0.599
ADO49271.1
PFAM: Fimbrial protein domain-containing protein; KEGG: cko:CKO_02327 hypothetical protein.
  
     0.599
ADO47905.1
KEGG: cro:ROD_21811 putative colanic acid biosynthesis pyruvyl transferase.
  
     0.563
ADO46960.1
KEGG: ebw:BWG_0234 CP4-6 prophage; hypothetical protein.
 
    0.552
ADO49336.1
PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: enc:ECL_03000 alpha-mannosidase.
  
     0.552
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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