Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADO46991.1PFAM: protein of unknown function DUF1190; KEGG: seh:SeHA_C3438 hypothetical protein; Belongs to the UPF0441 family. (222 aa)    
Predicted Functional Partners:
ADO46990.1
PFAM: glutathionylspermidine synthase; KEGG: kva:Kvar_0645 trypanothione synthase.
 
  
 0.974
ADO49332.1
Cyd operon protein YbgE; KEGG: enc:ECL_02996 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE.
  
     0.717
ADO48083.1
PFAM: Protein of unknown function DUF2594; KEGG: kva:Kvar_1694 protein of unknown function DUF2594.
  
     0.702
ADO49568.1
PFAM: Primosomal replication priB and priC; KEGG: efe:EFER_2550 primosomal replication protein N''.
  
     0.681
ADO50577.1
PFAM: protein of unknown function Spy-related; KEGG: sew:SeSA_A4277 periplasmic repressor CpxP.
  
    0.671
wzyE
WzyE family protein; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.
  
     0.670
ADO49987.1
PFAM: Virulence factor, haemolysin regulator; KEGG: cro:ROD_49101 hypothetical protein.
  
     0.663
ADO48459.1
PFAM: Haemolysin expression modulating family protein; KEGG: ctu:Ctu_20090 OriC-binding nucleoid-associated protein.
  
     0.662
bamC
Lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.661
wzzE
Lipopolysaccharide biosynthesis protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.
  
     0.658
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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