Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO46994.1PFAM: protein of unknown function DUF1249; KEGG: enc:ECL_04361 hypothetical protein. (140 aa)    
Predicted Functional Partners:
ADO46993.1
KEGG: kpn:KPN_03448 ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase.
  
  
 0.918
cpdA
Calcineurin phosphoesterase domain protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
  
  
 0.824
ADO46996.1
PFAM: protein of unknown function UPF0227; KEGG: kpu:KP1_4726 esterase YqiA.
 
     0.804
rsd
Regulator of RpoD, Rsd/AlgQ; Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase.
  
     0.644
parE
DNA topoisomerase IV, B subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
       0.636
ADO46992.1
KEGG: kpu:KP1_4730 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
       0.621
ADO47167.1
PFAM: protein of unknown function DUF903; KEGG: kva:Kvar_0828 protein of unknown function DUF903.
  
     0.616
ADO47827.1
PFAM: protein of unknown function DUF1282; KEGG: kva:Kvar_1492 protein of unknown function DUF1282.
  
     0.606
ADO49255.1
PFAM: virulence-related outer membrane protein; KEGG: ses:SARI_02093 outer membrane protein X.
  
     0.575
ADO47130.1
PFAM: protein of unknown function DUF339; KEGG: kva:Kvar_0740 protein of unknown function DUF339.
  
     0.570
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.