STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47036.1KEGG: eok:G2583_4322 inner membrane protein YiaW. (115 aa)    
Predicted Functional Partners:
ADO47035.1
PFAM: secretion protein HlyD family protein; KEGG: sea:SeAg_B3899 secretion protein HlyD family protein.
 
    0.948
ADO46425.1
PFAM: secretion protein HlyD family protein; KEGG: enc:ECL_00173 secretion protein HlyD family protein.
 
    0.781
ADO49694.1
PFAM: secretion protein HlyD family protein; KEGG: kpn:KPN_00517 putative secretion protein HlyD.
 
     0.777
ADO47034.1
Regulatory protein LuxR; KEGG: sec:SCV11 hypothetical protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
       0.651
ADO47033.1
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_0144 LysR family transcriptional regulator.
       0.566
ADO49479.1
PFAM: surface antigen (D15); KEGG: vfi:VF_2363 hypothetical protein.
  
     0.528
ADO48934.1
PFAM: protein of unknown function UPF0227; KEGG: ent:Ent638_1623 hypothetical protein; Belongs to the UPF0227 family.
  
     0.464
ADO49476.1
KEGG: spe:Spro_2511 hypothetical protein.
  
     0.431
ADO49478.1
KEGG: kpe:KPK_2561 putative lipoprotein.
  
     0.424
ADO47237.1
PFAM: Radical SAM domain protein; KEGG: ebi:EbC_21260 radical SAM domain protein.
  
     0.420
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.