Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADO47037.1Transcriptional regulator, AraC family; KEGG: cko:CKO_02450 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain. (285 aa)    
Predicted Functional Partners:
ADO46335.1
Transcriptional regulator, AraC family; KEGG: kpu:KP1_5395 putative AraC-type regulatory protein; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
   0.766
rhaR
Transcriptional regulator, AraC family; Activates expression of the rhaSR operon in response to L- rhamnose.
  
   0.763
ADO48549.1
Transcriptional regulator, AraC family; KEGG: cko:CKO_01552 DNA-binding transcriptional activator MarA; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.743
ADO49516.1
Transcriptional regulator, AraC family; KEGG: ecp:ECP_4361 DNA-binding transcriptional regulator MelR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.730
ADO50044.1
Transcriptional regulator, AraC family; TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein HpaA; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; KEGG: enc:ECL_00751 4-hydroxyphenylacetate catabolism regulatory protein HpaA; SMART: Helix-turn-helix, AraC domain.
  
   0.674
ADO47039.1
TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: enc:ECL_04349 major facilitator superfamily oligosaccharide/H+ symporter.
 
     0.659
ADO50031.1
KEGG: kva:Kvar_4457 transcriptional regulator, AraC family; PFAM: PAS fold-4 domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.594
ADO47038.1
PFAM: Uncharacterised conserved protein UCP014753; KEGG: ctu:Ctu_14700 hypothetical protein.
 
     0.591
ADO50191.1
KEGG: ent:Ent638_0382 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.561
ADO48678.1
Transcriptional regulator, AraC family; KEGG: enc:ECL_02161 transcriptional activator FeaR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
     0.511
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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