STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47040.1PFAM: glycosyl hydrolase family 88; KEGG: enc:ECL_04348 glycosyl hydrolase family protein. (396 aa)    
Predicted Functional Partners:
ADO47038.1
PFAM: Uncharacterised conserved protein UCP014753; KEGG: ctu:Ctu_14700 hypothetical protein.
 
     0.924
ADO47039.1
TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: enc:ECL_04349 major facilitator superfamily oligosaccharide/H+ symporter.
 
     0.816
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.785
ADO47041.1
PFAM: ThiJ/PfpI domain-containing protein; KEGG: cko:CKO_01049 hypothetical protein.
       0.776
ADO49508.1
PFAM: glycosyl hydrolase family 88; KEGG: cro:ROD_48241 hypothetical protein.
  
     0.670
ADO49506.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: str:Sterm_4045 xylose isomerase domain protein TIM barrel.
 
    0.661
ADO47157.1
KEGG: cko:CKO_04219 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR.
 
   
 0.568
ADO49922.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kva:Kvar_4344 short-chain dehydrogenase/reductase SDR.
 
   
 0.519
ADO47037.1
Transcriptional regulator, AraC family; KEGG: cko:CKO_02450 hypothetical protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
       0.432
ADO50158.1
6-phosphogluconolactonase; KEGG: kpe:KPK_5022 hypothetical protein.
  
    0.429
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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