STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47051.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: esa:ESA_02126 hypothetical protein. (310 aa)    
Predicted Functional Partners:
ADO47052.1
PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_02125 hypothetical protein.
       0.548
ADO49180.1
KEGG: cko:CKO_02224 hypothetical protein.
  
     0.519
ADO49185.1
TIGRFAM: general secretion pathway protein C; KEGG: cko:CKO_02229 hypothetical protein.
  
     0.488
ADO49975.1
PFAM: polysaccharide export protein; KEGG: ecq:ECED1_3595 polysialic acid transport protein precursor.
  
     0.484
ADO49492.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: kpe:KPK_1732 diguanylate cyclase/cyclic diguanylate phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein.
 
      0.451
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.