Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADO47071.1PFAM: protein of unknown function DUF469; KEGG: sdy:SDY_3113 hypothetical protein. (108 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
  
    0.844
ADO47072.1
KEGG: cko:CKO_04333 hypothetical protein.
 
     0.705
ADO50624.1
PFAM: protein of unknown function DUF1040; KEGG: enc:ECL_05123 hypothetical protein.
  
     0.673
ADO47778.1
PFAM: 37kDa nucleoid-associated protein; KEGG: sed:SeD_A2577 nucleoid-associated protein NdpA.
  
     0.600
yihI
Protein of unknown function DUF414; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.
  
     0.567
ADO47069.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.551
ADO46791.1
TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: ssn:SSON_3330 D-alanyl-D-alanine carboxypeptidase/endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C.
 
     0.536
mltC
Lytic transglycosylase catalytic; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.
 
     0.536
ADO48994.1
KEGG: efe:EFER_1895 hypothetical protein.
  
     0.535
ADO50462.1
KEGG: enc:ECL_04985 adenylate cyclase; PFAM: adenylate cyclase class-I; Belongs to the adenylyl cyclase class-1 family.
  
     0.529
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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