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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47072.1KEGG: cko:CKO_04333 hypothetical protein. (239 aa)    
Predicted Functional Partners:
ADO47591.1
PFAM: protein of unknown function DUF1131; KEGG: efe:EFER_0740 hypothetical protein.
  
    0.794
ADO46291.1
PFAM: protein of unknown function DUF1375; KEGG: enc:ECL_00014 hypothetical protein.
  
   
 0.786
ADO46494.1
PFAM: peptidase M16 domain protein; KEGG: kpu:KP1_5218 putative peptidase.
  
  
 0.786
ADO48787.1
KEGG: enc:ECL_02427 putative regulatory protein.
  
     0.774
ADO46556.1
PFAM: protein of unknown function DUF1145; KEGG: kva:Kvar_0269 protein of unknown function DUF1145.
  
     0.773
secM
Secretion monitor family proten; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.773
ADO47562.1
KEGG: enc:ECL_03770 hypothetical protein.
  
     0.772
ADO48994.1
KEGG: efe:EFER_1895 hypothetical protein.
  
     0.772
thiK
Thiamine kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
  
     0.771
ADO49845.1
KEGG: enc:ECL_00927 hypothetical protein.
  
     0.771
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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