STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO47080.1KEGG: kpe:KPK_0725 twitching motility family protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E. (326 aa)    
Predicted Functional Partners:
ADO49182.1
KEGG: cko:CKO_02226 hypothetical protein; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain.
 
  
 0.822
ADO49863.1
PFAM: Type II secretion system F domain; KEGG: cko:CKO_03270 type IV pilin biogenesis protein.
 
  
 0.822
ADO47286.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.815
ADO49174.1
Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.814
ADO46621.1
Type IV pilus secretin PilQ; KEGG: kpn:KPN_03762 outer membrane porin HofQ; TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein.
 
   
 0.761
ADO47284.1
Type II secretion system F domain protein; KEGG: cro:ROD_46541 putative type IV pilus biogenesis protein; manually curated; PFAM: Type II secretion system F domain.
 
  
 0.726
ADO49181.1
KEGG: cko:CKO_02225 hypothetical protein; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G.
 
  
 0.639
ADO47079.1
Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.
       0.632
ADO46670.1
PFAM: peptidase A24A prepilin type IV; KEGG: enc:ECL_04699 leader peptidase HopD; Belongs to the peptidase A24 family.
 
   
 0.630
ADO47076.1
Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
     
 0.628
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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