Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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co-expression
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gene co-occurrence
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[Homology]
Score
ADO47120.1KEGG: kva:Kvar_0726 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase. (400 aa)    
Predicted Functional Partners:
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
 0.988
ADO47119.1
2-polyprenyl-6-methoxyphenol 4-hydroxylase; KEGG: enc:ECL_04234 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase.
 
 
0.923
ubiD
UbiD family decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.
    
 0.923
ADO46818.1
PFAM: peptidase U32; KEGG: cko:CKO_04554 hypothetical protein.
    
 0.916
ADO46819.1
PFAM: peptidase U32; KEGG: ssn:SSON_3304 putative collagenase.
    
 0.914
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.913
ADO46820.1
PFAM: Sterol-binding domain protein; KEGG: enc:ECL_04539 hypothetical protein.
     
 0.911
ADO47118.1
PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: kpe:KPK_0756 proline aminopeptidase P II.
  
  
 0.835
ADO47117.1
yecA family protein; KEGG: sfv:SFV_2957 hypothetical protein; TIGRFAM: yecA family protein; PFAM: Uncharacterised protein family UPF0149 (YgfB); Belongs to the UPF0149 family.
     
 0.793
ubiA
4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
   
 0.790
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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