Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADO47127.1PFAM: protein of unknown function DUF437; KEGG: efe:EFER_2836 hypothetical protein; Belongs to the UPF0267 family. (103 aa)    
Predicted Functional Partners:
ADO48993.1
PFAM: protein of unknown function DUF1097; KEGG: cko:CKO_02033 hypothetical protein.
  
     0.734
ADO47816.1
PFAM: protein of unknown function DUF1097; KEGG: sdy:SDY_1001 hypothetical protein.
  
     0.726
ADO47126.1
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: enc:ECL_04227 putative RpiR family transcriptional regulator.
       0.638
ADO48174.1
PFAM: protein of unknown function DUF991; KEGG: enc:ECL_01425 hypothetical protein.
  
     0.638
ADO48308.1
PFAM: DsrE family protein; KEGG: kva:Kvar_1957 DsrE family protein.
  
     0.628
ADO50009.1
KEGG: cro:ROD_48621 hypothetical protein.
  
     0.628
menC
O-succinylbenzoic acid (OSB) synthetase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.585
ADO50196.1
PFAM: Opacity-associated protein A domain protein; KEGG: kpu:KP1_0473 putative cell envelope opacity-associated protein A.
  
     0.564
ADO49420.1
KEGG: efe:EFER_2482 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like.
  
     0.563
ADO48144.1
Aromatic amino acid transporter; KEGG: kpu:KP1_3537 tyrosine-specific transport protein; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease.
  
     0.549
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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